civic-client
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griffithlab
Web client for CIViC: Clinical Interpretations of Variants in Cancer
Consider pulling in data from cancerhotspots.org. Comparison of other options not available through myvariant.info: https://docs.google.com/spreadsheets/d/1xML949NWzJGcvltjlquwSRIv79o13C_sfrVPAU5ci9Q/edit#gid=258442188 - Although this makes me think that Cancer Gene Census through open-CRAVAT would be another...
Instances where N/A is manually selected should continue to display as they currently do. Instances where N/A is enforced (ex: the user is never given a choice to select a...
I've noticed that I'm able to submit revisions to `Variants`, `Variant Groups`, and `Genes` without needing to write a comment. For `Evidence Items` and `Assertions`, the `Submit Revision` box is...
I didn't think this was possible so I just want to suss out if this is an implementation mistake or something happened at the time of submission. In the admin...
See original issue from @jakelever: https://github.com/griffithlab/civic-server/issues/677 tl;dr EID:2062 has a single double quote at the beginning that is breaking the TSV dumps. I've submitted [a revision](https://civicdb.org/events/genes/37/summary/variants/104/summary/evidence/2062/talk/revisions/list/35059/summary#evidence) that will fix this...
Clinical Significance should mention the new Oncogenic evidence type >Positive or negative association of the Variant with predictive, prognostic, diagnostic, or predisposing evidence types. If the variant was not associated...
Related to: https://github.com/griffithlab/civic-client/issues/1592 Once docs have been updated we should add help doc links to each line of Evidence and Assertion Add pages to point to specific sections of the...
21 Predictive EIDs (11 approved) are currently in CIViC that have N/A listed as their clinical significance. Upon a brief review, some of these should be reclassified as other evidence...
At the very least we should add a link to the docs at the top of the form to remind people. - Add Assertion - Add Evidence
The current tooltip for drugs used in **Combination** has a small typo: ```The drugs listed were used in as part of a combination therapy approach``` In addition, this Issue could...
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Web client for CIViC: Clinical Interpretations of Variants in Cancer