Giovanni Palla

icon location Palo Alto

Results 400 comments of Giovanni Palla

Image segmentation and extract segmentation features

closing due to inactivity, feel free to reopen

Default color of segmentation masks

closing due to inactivity

how to apply custom transformation to image crops before feature extraction

closing due to inactivity

Calculate Moran's I statistic using `obsm` or `obs`

closing

Pass/Retrieve matplotlib ax instance to/from plots

hi all, I believe it is now possible to pass axis and figures for a bunch of functionalities. I'll close this but please feel free to reopen (also `napari-matplotlib` is...

omnipath geneID

hi @wangjiawen2013 , indeed I believe you are correct wrt to source and target. WIll Close this but please feel free to reopen

Plotting different conditions together using pl.ligrec

hi @Tonyspuri indeed you'd have to tweak `sc.DotPlot` , this is not a priority for now but happy to support if you want to submit a PR. Othewise, I would...

Variable grouping to `squidpy.pl.ligrec`

hi @dnjst , do you still have interest in submitting this as a contribution? Otherwise would close this due to inactivity

Nanostring reader error

fixed in main

how to get the result from each permutation in gr.ligrec

closing due to inactivity