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A collection of Galaxy-related training material

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- [x] Lint for `no_toc`, you don't need it, stop using it. - [x] Lint for iframes, they're wrong 95% of the time. - [x] fix frontmatter linting bug https://github.com/galaxyproject/training-material/issues/2243...

template-and-tools

This PR: - Adds several tutorials (disabled with the PR to give time to review them after a pilot workshop) about pedagogy, tutorial design, training delivery, mostly based on the...

Dear @shiltemann @bgruening @lldelisle, I need some revision for the CUT&RUN training material. - [ ] Test data is ready (two replicates paired-end, down sampled and a ChIP-seq peak file,...

A new tutorial created for the BeerDEcoded project by the Streetscience : community[https://streetscience.community/projects/beerdecoded/](url) This PR includes: - tutorial.md file - tutorial.bib file - main_workflow file - 8 graphs and charts....

new tutorial
new contributor(s)

No additional paragraph text; I added it so that the key points section is displayed separately (and not as part of the previous section) _Originally posted by @jdavcs in https://github.com/galaxyproject/training-material/pull/3531#discussion_r917083186_

- [x] Update training material, somehow noindex the /training-material/ proxied stuff. https://github.com/galaxyproject/galaxy/pull/14283 - [ ] Figure out why galaxyproject.github.io/training-material/ is above training.galaxyproject.org ????

https://training.galaxyproject.org/training-material/topics/data-science/ all of the python-modular section should be auto-tagged. Also with pyolite.

New tutorial on data preparation for phylogenetic analysis (mask repeats, predict proteins, find orthologs and align)

This PR is to add a tutorial about my Master Project "Reproducing Critical Assessment of Metagenome Interpretation assembly challenge on marine dataset with Galaxy" into training.galaxyproject

new tutorial