FRASER-analysis

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Hello, first of all, thank you for your great work. I have recently started to use FRASER 2.0 for aberrant splicing analysis and I have some doubts regarding FRASER even...

mmartinezj

I tried to run the FRASER package on a public dataset GSE119954 with an identified splice site variation as a pilot study before using my data. I used a sample...

Hasanmshamsi

Excuse me, when you were doing the analysis of clipping outliers, leafcutter was used to export the results and then you adopted a function called clustergenemapping. Is this your definition?...

zyyy97

Can Split-read data for the Kremer et al. dataset be used directly as input?

1

I am trying to reproduce the results of FRASER on the application of rare disease diagnosis and I downloaded the split read data from the link given in the article...

RacconC

At [repository setup](https://github.com/gagneurlab/FRASER-analysis#repository-setup), line: `git clone https://i12g-gagneurweb.in.tum.de/gitlab/mertes/rare-disease-leafcutter` Unable to access repository.

aheritas

There is no install_dependencies.R file at /src/r/

1

Hello, I'm student of systems biology and bioinformatics graduate program and I aimed to reproduce FRASER. I have followed the constructions of readme.md and downloaded the repo and its dependencies....

canankolakoglu