Daniel Bunis

`dittoPlot()`s nolonger render as intended when `do.hover = TRUE`

1

There have always been some differences after plotly conversion, but it's definitely gotten worse than before. (Before: seemed to just be that boxplots always showed outliers in the past, and...

Add neighborhood diversity calculation and plotting

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This PR adds a new functionality and plotters to go with it: - calculation of diversity within cells' nearest neighbors Motivation: Plotting such data can be VERY useful for batch...

Adds capabilities: 1. Use a custom function as `color.method` for discrete `color.var`-data 2. Use a custom function that outputs either numeric or discrete type outputs for discrete or numeric `color.var`-data....

Mounting a Persistent Volume Claim as Volume within a Pod's Container spec doesn't seem to work.

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**What happened (please include outputs or screenshots)**: A pod is created from the manifest below, but the `volume` meant to target a persistent_volume_claim is instead created as EmptyDir, and container...

Per #156 This PR makes `adjustment` application more consistent by applying them to metadata vars instead of only to gene/feature vars. ToDo: - [ ] Decide if an input like...

## This update achieves a longstanding goal of replacing the bulk of dittoSeq innards with their dittoViz counterparts Follows [dittoViz branch 'dittoSeq-align'](https://github.com/dtm2451/dittoViz/pull/28), which has now been merged and become dittoViz-v1.0.5...