Damion Dooley
Damion Dooley
Discussed on May 3rd call. History: past BFO work foresaw a "**system**" class under which systems could be modelled in more domain specific ontologies. RO thus introduced a "system" class...
1) Phenotypes can be observed/measured, or inferred from data (e.g. genomic sequence data). If inferred, there is a degree of uncertainty as to whether the expected phenotype will actually inhere...
We wanted to find out if SO is the place for a “genetic variation type” term or should it go in EDAM (under “genetic variation”) . There can be many...
As a result of the ICBO 2022 FoodOn food processing hackathon on Sept 25, discussion arose on formalizing meal types as a kind of food consumption process, and courses/dishes. Feedback...
In Protege am I mistaken that xsd:dataType should be set for DataType when adding a dcterms:date annotation to a class or instance ? I currently use dcterms:date to annotate when...
We need to finesse the terms used to describe hazardous vs. safe to eat food, before they are entered into FoodOn. We're looking at this kind of structure: Basically, some...
The [characteristic](https://docs.google.com/spreadsheets/d/1VJtz4m67tdUNDqRe3m1Okdxll64nTR46GSvCOmb0APE/edit#gid=1474789182) tab in the enumerates all the food qualities that foodon will contain. This issue keeps track of development tasks for this tab. - We will focus on finishing...
Related to how food and nutrients are defined, this diagram explores the different ways food or nutrients are ingested or injected into organisms with gastrointestinal tracts: The terms need to...
We are mapping FoodOn to IMPS, but didn't yet cover sausage related products: https://www.ams.usda.gov/sites/default/files/media/LSimps800.pdf
A paper titled: "[The Ontological How and Why - Action and Objective - of Planned Processes in the Food Domain](https://www.frontiersin.org/articles/10.3389/frai.2023.1137961/full)" just published on July 4, 2023, invites community feedback for...