David Steinberg

I don't want to rush this into the release, but I would love to get feedback!

To close this, add a deploy script that deletes the test directories before creating the release.

Related: https://github.com/ga4gh/server/issues/1055 https://github.com/ga4gh/server/issues/1073 @bwalsh It wouldn't hurt to get a `cgd.ttl` in there too! We can host it on github.

After talking this over with @dcolligan, we would like this script to work against amazon, since the EBI ftp can be a bit flaky. The example data script will probably...

We could host our own data that demonstrates all of the endpoints that doesn't require having any of the binary tools to slice, but are reflective of real world data....

Good point @andrewjesaitis , I think docker is a better requirement than samtools for software people, and vice versa for biology people. I think we might prioritize solving this without...

Yes, it happens for non-S3 urls as well. Note that the downloaded indexes are in whatever directory the repo command was called from and that they are downloaded and left...

It appears AWS reads support is acceptable. Remote VCF and FASTA still have a few problems. I would like to close this issue and continued detailed discussion of the VCF...

Thanks @jeromekelleher linked properly now!

Yeah OK, it would be a very long title but something like "use required:true in params and array in JSON schemas definitions". ;) https://github.com/ga4gh/data-object-service-schemas/blob/master/openapi/data_object_service.swagger.yaml#L551 https://github.com/ga4gh/data-object-service-schemas/blob/master/openapi/data_object_service.swagger.yaml#L530