Dave B.

Ping @jxtx due to expressed interest.

I wasn't sure this should be applied to the `master` branch. Then I remembered that this is tools-iuc, not galaxy.

@bgruening I have a fix for the upload datatype test on my local branch, and I'm also almost done with a data provider for the datatype.

Thanks for the feedback, @davelopez, this type annotation stuff is new to me.

@bgruening not surprising, I just checked, and all of them are in `.tt_skip`

It might be interesting to see how _many_ errors we get? I know that anything depending on package_taxonomy will fail, because the bitbucket URL to download that tarball is now...

This needs some more work before it can be merged.

I was able, with [some changes](https://github.com/davebx/FASTK/tree/v1.0), to use the following conda recipe and script to build a fastk package: ```yaml {% set name = "FASTK" %} {% set version =...

I'm investigating this now, should have something to report within 24 hours.

24 hours not counting weekend, that is. I've tested cuffdiff 2.2.1.5 locally, and it happily outputs SQLite which renders fine with the updated cummeRbund wrapper. I'm going to test with...