Dan King

icon indicating an email [email protected]

icon location New York, NY icon location A software engineer and leader building systems that enable the discovery of novel biology.

Results 218 comments of Dan King

[query] Support Spark 3.5.x

We will be skipping Spark 3.4.x and jumping to Spark 3.5.x because Google Dataproc has skipped to 3.5.x. https://cloud.google.com/dataproc/docs/concepts/versioning/dataproc-release-2.2

[query] also prevent reading from cold storage

lemme fix the bugs first

[pypi] enable 2FA, move off of group account

We have requested an organization for us.

[pypi] enable 2FA, move off of group account

@daniel-goldstein send another email please!

[pypi] enable 2FA, move off of group account

PyPI is drowning in requests and will get to us "eventually".

[pypi] enable 2FA, move off of group account

We now use an API token linked to hailgenetics instead of password auth. In order to do the org request, Daniel set up 2FA. There's no way to set up...

[pypi] enable 2FA, move off of group account

Still no news

[pypi] enable 2FA, move off of group account

still no updates

Initial upload of VQSR workflow

Hey all, this is the sort of thing I'd love to pull into Hail mainline. Perhaps best to discuss after v4 is released, but I'd like to ask: Are y'all...

Initial upload of VQSR workflow

@LindoNkambule Is this still the latest and greatest VQSR batch pipeline? Hail team just generated wave 2 of BGE and I'd like to deliver it to the analysts *with* VQSR...