curtisjamison

double line entries for indels.

1

Hi Strelka team - We occassionally see double line entries around indels. The first entry is a reference call for the base before the indel, and the second entry is...

VCFv4.2

3

Any chance you'll be upgrading the output to VCFv4.2? vcftools vcfconvert doesn't like the ALT designations and won't update the file. Thanks, Curt

SmallPedigree-WGS System.ArgumentOutOfRangeException: Index was out of range.

15

Hi - We encountered an error running canvas Germline WGS. The bam seems to be okay as both the strelka and Manta VCF both have data that has passed filter,...