Charles Tapley Hoyt
Charles Tapley Hoyt
This is an attempt to reconcile Orphanet and ORDO, which have weirdly overlapping synonyms. It's still not clear if these should be merged into a single namespace, or reorganized in...
Closes #691 The Global Biodata Coalition's application for Global Core Biodata Resources requires reporting some user metrics. Therefore, it gives motivation to add some kind of usage tracking to the...
In #952, we aligned the RRID resources with the Bioregistry. However, there are a number of resources referenced in RRID that didn't align to existing Bioregistry prefixes, nor could they...
IDMP is one of Pistoia Alliance's big ontology projects. Could use some investigating to figure out if there are public artifacts for this and if it could use aprefix GitHub:...
- [x] Add field for annotating identifier standards organization via ROR. If there's one annotated, it's required that a contact person is present. - [x] Add new predicate to RDF...
Add more prefix and punctuation variants to export. E.g., `meddra` should export `MEDDRA` since it's an uppercase variant, even though it's not explicitly annotated Also, check that preferred prefixes are...
Support for keywords was added in #688 and additional manual curation was added in #699. A test for checking that _all_ Bioregistry entries have keywords is also implemented, but disabled,...
given a datafame - identify what columns are 1. look for index column that ascends numerically, either starting at 0 or 1 2. look for column names that can be...
originally from https://github.com/biopragmatics/bioregistry/issues/871 > Also this text is confusing: > > The legacy MIRIAM standard for generating CURIEs with this resource annotates the namespaceEmbeddedInLUI as true. This means that you...