Charles Tapley Hoyt
Charles Tapley Hoyt
As suggested by Chris in https://github.com/biopragmatics/pyobo/pull/168#issuecomment-1920408543, I am bringing this to the RO issue tracker. I want to use well-defined RO properties to model the relationships between reactions in Rhea,...
Can we add a QC check that filters on entities that are created after a certain date (e.g., October 2, 2023) and requires that they have at least one "example"...
This PR replaces usages of `prefixcommons` with `curies`. This is the first step towards more principled management of I/O of prefix maps that has the following benefits: 1. Prefix map...
The ChEBI record has a provider `chebi-img` that is also from ChEBI, but it resolves to an image instead of a webpage. This PR enables marking additional providers that are...
suggested by chris https://iphylo.blogspot.com/2024/02/problems-with-datacite-data-citation.html
Publons is a useful resource to keep a prefix for, but it requires authentication to resolve an entry: https://bioregistry.io/registry/publons.researcher Adding additional information to a provider that says if it requires...
This is an epic issue on identifying where Prefix.cc is used, since that typically leads to places where prefix maps are consumed. Here we can keep track of different ways...
Closes #935 This PR automatically adds both the upper- and lowercase variants of all prefix synonyms for each record. This makes it much more simple to create comprehensive EPMs (instead...