C. Titus Brown issues

Results 624 issues of


                                            C. Titus Brown

some thoughts on modulo hash & modimizer, and connections with sourmash 'scaled' signatures

hi @richarddurbin, @luizirber pointed me at this repo and I wanted to drop you a note -- we have been using an analogous concept in [sourmash](https://github.com/dib-lab/sourmash/), that is identical in...

FYI - Python bindings are now available via PyPI and conda-forge

hello @rizkg I just wanted to let you know that my Python bindings for your code, https://github.com/dib-lab/pybbhash, can now be installed via standard Python `pip` as well as via conda,...

Corrected typo

mac os wheel builds are failing in latest

maybe because github updated mac os image https://github.com/actions/runner-images/pull/9726

maturin build is failing on latest for maturin wheels, arch `ppc64le`

some really strange errors on the maturin wheels CI - ``` The following warnings were emitted during compilation: warning: [email protected]: liblz4/lib/lz4.c:222:11: fatal error: 'stdlib.h' file not found warning: [email protected]: 222...

add `sig grep -l` to just print out the names of matches

does `--relpath` in sourmash sig manifest etc. convert abspaths into relpaths?

I don't think it does. It probably should. Related issues: * https://github.com/sourmash-bio/sourmash/issues/3008 * https://github.com/sourmash-bio/sourmash/issues/3071

pursue spack release PR for sourmash 4.8.4 and beyond

see https://github.com/spack/spack/pull/40062, which has been stalled for a while

add conda-forge & sourmash-minimal into release checklist

release checklist only says to check bioconda/`sourmash` package, but might as well also check conda-forge/`sourmash-minimal`.

`Index.select` allows ksizes that aren't an integer.

@ccbaumler was running into this in a script, and it took us a bit to figure out why `Index.select(ksize="21")` was yielding 0 sketches :). (It wasn't as obvious in the...