C. Titus Brown
C. Titus Brown
hi! looks like an arm64 package isn't being built. further investigation suggests that maybe bioconda doesn't do arm64 yet: https://github.com/bioconda/bioconda-utils/issues/706, https://github.com/bioconda/bioconda-recipes/issues/23454. conda-forge seems to, however. so, just dropping this here,...
apparently 2.1.2 never made it to pypi :)
Spurred by #1540, I'm converging on two principles regarding non-ACGT: * we shouldn't ever silently ignore an entire sequence record, because that leads to surprisingly inconsistent behavior between short reads...
It would be nice to have a unified way to enable/disable logging at both the Python and C++ levels. For a survey, see: https://twitter.com/ctitusbrown/status/601745781771603971 https://twitter.com/ctitusbrown/status/601745886054653952 and conversations therein.
it would be nice to be able to use the next release of khmer with the current version of sourmash, and I think right now sourmash depends on khmer.load_nodegraph which...
Try fixing compile errors for `cpp-demos` on Mac OS X, ref https://github.com/dib-lab/khmer/pull/1859#issuecomment-390262027, by switching to using the system C++ rather than g++. This will be a pull request into #1859...
see https://github.com/dib-lab/sourmash/pull/478
...instead of 2.1.2. We should include updating the readthedocs pointer in the release notes!
it's left empty in SETUP_METADATA but then not filled in in CLASSIFIERS... maybe that's the problem?
``` % pip show khmer Name: khmer Version: 2.0+715.gd841a57 Summary: khmer k-mer counting library Home-page: https://khmer.readthedocs.io/ --- Logging error --- Traceback (most recent call last): File "/Library/Frameworks/Python.framework/Versions/3.5/lib/python3.5/logging/__init__.py", line 982, in...