Charlotte Soneson

Light-weight Snakemake workflow for preprocessing and statistical analysis of RNA-seq data

csoneson

Create QC and summary reports for Alevin output

csoneson

Code for evaluation of differential expression methods in single-cell RNA-seq data

csoneson

countsimQC - Compare characteristic features of count data sets

csoneson

Explore design matrices interactively with R/Shiny

csoneson

Code for the paper "A comprehensive examination of Nanopore native RNA sequencing for characterization of complex transcriptomes"

csoneson

Evaluation of the effect of quantification choices on RNA velocity estimates

csoneson