Charlotte Soneson
Charlotte Soneson
**Describe the bug** Annotation colors are sometimes scrambled in ComplexHeatmap panels compared to other panels **To Reproduce** ``` library(iSEE) sce
**Describe the bug** If one filters a column or row data table, and subsequently exports the panel output, the full table is exported. **To Reproduce** ``` example(iSEE) ``` * In...
https://cran.r-project.org/web/packages/ggfittext/vignettes/introduction-to-ggfittext.html
Currently only treatment coding is implemented. Allow selection of other types.
Add the ability to deselect specific rows in the full sample table, and update the other panels accordingly.
At the moment, `iSEE` is not making use of any information present in the `rowRanges`. Any thoughts about adding this data as columns in the `rowData`, e.g. in https://github.com/iSEE/iSEE/blob/devel/R/cleanDataset.R? Perhaps...
Fix typo: `listBuildInFilterStats` -> `listBuiltInFilterStats`
To illustrate a typical (and a not-so-good) RNA-seq FastQC report, see if we can find links to public ones.
For consistency with the suggestions made in episode 2, the assembled SE object in episode 3 should go in `output/` rather than in `data/`.
Change the color palette in the barplot of library sizes in episode 4, so that male and female samples have different shades of the same color.