Colin Davenport

Weird. I had this "bash fork bomb" recently multiple times on Ubuntu1604 for another tool (ncdu) on only one cluster machine. Would be very interesting to find the cause.

It was just a warning for others based on an environmental error, happy to provide further details if needed.

Hi @chogata , thanks for the details. - Master Ubuntu 20.04 - 7.5GB HD (only 23MB was observed on partition /, so "100% full" ``` MooseFS versions ( I guess...

Yes, exactly

Yes. Interesting. I always use the non-systemd variant, similarly with chunkservers. Seems to work fine (of course I don't restart or stop the master often, if I can, unless after...

I have probably just had the same problem. I think he means he has an institutional firewall / proxy and the port 9009 is blocked (as is probably happening at...

There is this unofficial version, works for me so far, but having problems with the both singularity and docker versions not completing/terminating. https://github.com/nanoporetech/bonito/issues/70

Hi @pwh124 , I think the "skipping" output is the problem but aren't sure why it is occurring. You can try `bonito download --models -f` My output: ( will try...

Why not use minimap2 as opposed to bwa mem1 or 2 for aligning nanopore data ?

solved if I specify the correct executable `bwa-mem.avx2 index x.fa`