Colin Diesh

Might be caused by the sticky view headers change

LTR repeat glyph example

1

You can get some of the way towards this by using just the existing glyph rendering system e.g. just manipulating color1, but there are weaknesses 1) There is a "repeat_region"...

Look in IndexedDB for local storage ID

1

Currently almost anytime you try to load a link that has a "&session=local-XXXXXXXXX" type link it will fail This is because it only looks in the sessionStorage, and this frequently...

Add ?data= parameter

3

This allows users to specify ?data=test_data to load test_data/config.json This was proposed previously but stopped to let perfect be the enemy of good...maybe just let a little imperfect in https://github.com/GMOD/jbrowse-components/pull/3192

Create more track type adapters for circular view

1

Example: drawing CNV tracks along the ring of the circle, genes, etc.

Create 'multi-synteny adapter'

9

Could investigate use of "all vs all" PAF This is done by e.g. ``` cat hg19.fa hg38.fa t2t.fa hg002.fa > all.fa minimap2 all.fa all.fa > all_vs_all.paf ``` This would be...

Sometimes very 'gene-like' bed12 represents a differnt data type Example: Tandem duplications bed We try to heuristically determine whether data is gene like, and if so, make it 'parse' as...

There is a system for jbrowse-web that lets you copy and paste the URL from one tab to another, and it uses BroadcastChannel to get the info from the old...

might need true browser tests...jsdom serves us well but only does mainthreadrpc

Allow triggering a retry if webpack chunk loading fails

1

There are some "auto-retry" scripts like https://www.npmjs.com/package/webpack-retry-chunk-load-plugin but i'd prefer a manual retry button in some cases. Feels like i have more control that way. Our tracks have 'retry' scripts...