Colin Diesh

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Results 919 comments of Colin Diesh

Published npm packages .d.ts files referring to src dir

i think turning on skipLibCheck:true fixes this, so maybe low priority. similar skipLibCheck issue hre https://github.com/GMOD/bam-js/issues/97

Possible idea for 'lazy loading' tracks from connections

I think we have created instead the 'extension point' to load "unknown assembly". this solves some of the fundamental problems we were brainstorming here: e.g. loading the mouse tracks when...

Possible idea for 'lazy loading' tracks from connections

this idea would enable better ability to open e.g. trackIds via a URL bar from a connection

Update Jobs List Widget to use IDs

just for centralizing potential job manager improvements, linking https://github.com/GMOD/jbrowse-components/issues/3196

Add ability for locally opened files to survive page refresh

fairly broad browser support now https://developer.mozilla.org/en-US/docs/Web/API/File_System_API

Create simplified session spec for launching synteny views

here was the lgv PR https://github.com/GMOD/jbrowse-components/pull/4907

Create helper functions for static blocks and dynamic blocks calculations, and tests to ensure synchronized settings

Indeed, I meant to comment that this branch is broken still, I think it has all bugs related to the the screenshots that I posted in the other thread and...

Initialize pluginManager without any tracks loaded at first, and then load rest of config secondarily

There might also be a connection to https://github.com/GMOD/jbrowse-components/issues/4988 regarding lazy loading data from connections

Support CS tag in synteny rendering

alternatively, resolving this for CIGAR with X/= instead of just M might be useful. seen for the xmfa -> paf converter which includes X/=, and the snp's are not labeled...

Support CS tag in synteny rendering

one idea is to decode the cs tag into a CIGAR on the fly. this is already sort of done with PAF where it re-encodes CIGAR as query-relative or target...