Chen Yang
Chen Yang
Thank you for reporting this. I have just fixed the bug and made a new commit. BTW, this new version of genome mode allows for chimeric reads simulation. If that's...
Yes, you just need to run `simulator.py` to simulate ONT reads. You can find the help info in the README.md file.
Right, if you want to use your own model, you have to run step1 first. However, if you don't want to train your own model, you can direct `-c` to...
It happened to me yesterday as well. You'll need to clone the whole repo, or click into the pretrained model folder from Github and then click the model you want...
This issue has been reported by other users in #81 , could you try `from sklearn.externals import joblib` instead of `import joblib` and see if it occurs?
Hi @Leejquan, We have an update on this issue. we have finally finished all the coding and testing to change the way of importing model files. We also have re-trained...
Hi @jkomyno , it seems that the error lies in line 5, so could you check what does line 5 look like?
It looks like a normal header generated by NanoSim. My intuition is that the `;` is causing the problem. I quickly checked `fqtools` manual and it seems you can specify...
I thought you said there was no error with unaligned reads before?
Hi @jkomyno, sorry for no update recently. I don't know much about the validity criteria about `fqtools`. Based on your comment in `isONclust`, it seems that the tool didn't read...