Chen Yang

Hi @jkomyno, Sorry for the late reply. I finally got time to install fqtools now. I repeated your simulation command but with the pre-trained human DNA dataset models as input....

Hi @mhuang00, Q1: First of all, the number in the middle, for example `14611`, `1127`, and `7966` are the aligned bases on the reference genome, not on the simulated sequence,...

Hi @DafniG , Sorry for the late reply. For your first question, if the heterozygous allele is not provided as a reference, NanoSim won't know how to introduce SNPs or...

Hi @molleraj, Sorry for the late reply. NanoSim can take FASTA file with multiple entries. If you concatenate all sequences into one, you may have simulated reads that span multiple...

Hi @dacheampong , could you try with less threads? Normally we do not suggest simulating a small number of reads with so many reads, because it will affect the accuracy...