Vladimir Gorshkov

Have exactly the same issue. Software specifications GnuCash Android version: 2.4.0 System Android version: 10 QKQ1.190828.002 Device type: POCOPHONE F1

Hi @dtabb73 , Thank you for reporting. From the stack trace it seems that one of the scans is missing the header information. I am not sure if it happens...

Hi @dtabb73, I can confirm that the problem is missing header information (so-called _trailer_). That seems to be a peculiarity of "Xtracted" files. The second file you shared have it...

The new version can generate proper MGF files, the precursor charge state is, however, missing. It seems that trailer is the only source of precursor charge information. In some cases...

Hi @dtabb73, MGF format omits MS1 scans by design. To the best of my knowledge, MGF is intended only for fragment spectra, thus, having MS1 scans will create _unexpected_ entries...

From what I can see the spectra in MSn Browser are not stored in RAW file, but generated on the fly based on value of the precursor mass, i.e. all...

In the new release (1.4.1 from today), the total number of errors and warnings is reported at the end of the processing (no grouping by the type, though) as an...

Hi @AnStaes, thank you for using ThermoRawFileParser. At the moment you can only process raw files into mzML in batch and extract pressure profile from them. A pressure trace is...

Hi again, you are welcome to use the python script (see the gist link below) that does the extraction of the pressure chromatograms from mzML file; it can be invoked...

Hi @wdwvt1, Thank you for using TRFP. Unfortunately, there is no special way to determine a pressure trace in RAW files, they might be written as, so-called, A/D traces, UV...