Tangram

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Hello, thank you for creating Tangram! I am using Tangram to deconvolute my Slide-seq data and was wondering how long the training step typically takes. My two datasets contains 2928...

annaminyifeng

```python df = one_hot_encoding(adata_map.obs[annotation]) if "F_out" in adata_map.obs.keys(): df_ct_prob = adata_map[adata_map.obs["F_out"] > threshold] df_ct_prob = adata_map.X.T @ df df_ct_prob.index = adata_map.var.index ``` The output of the function does not change...

atharva-bhagwat

Greetings, I have a query about the alignment step. I have to integrate 2 single cell datasets and then use it in Tangram for the alignment portion. I use Seurat...

abhishekmaj08