Brent Pedersen

igv.js standalone page generator and automatic configuration to view bam/cram/vcf/bed. "working in under 1 minute"

brentp

open files for buffered reading and writing in #golang

brentp

using all the bits for echt rapid variant annotation and filtering

brentp

don't get DUP'ed or DEL'ed by your putative SVs.

brentp

A Practical (And Opinionated) Guide To Analyzing 450K Data

brentp

sequence alignment. global, local, glocal.

brentp

a pileup library that embraces the huge

brentp

python wrapper to submit jobs to bsub (and later qsub)

brentp

python wrapper to dpryan79's bigwig library using cffi

brentp

fast and accurate alignment of BS-Seq reads using bwa-mem and a 3-letter genome

brentp