Brent Pedersen

Results 878 comments of Brent Pedersen

Integers are printed as expected. The problem is the scale parameter which turns ints into floats even with it is 1.0. This program: ```c++ #include #include int main() { double...

I will make a PR that sets precision(0) where appropriate and when scale == 0. It will reset precision to the default after each function call.

@camelest . I added a test this time for the latest fix, but if you could verify that this works on your data, it would be much appreciated. [bedtools.static.gz](https://github.com/arq5x/bedtools2/files/10156986/bedtools.static.gz)

I'd be interested in using something like this if it were in noodles.

Thanks @zaeleus . A really clean implementation. I'll look into expanding this in the future.

This is implemented in latest release

Hi, I think you could simply update the duphold bioconda recipe and make a pull-request and it would solve this issue.

@ruthbpaula your samples also have no hets? I don't think that peddy can work well in that case.

@ruizgo which error? the svd_sovler error? Any recent version is fine. If you are seeing an error like in the first message (`KeyError: u'1:900505:G:C'`), then you must be using a...

This means that there was only 1 SNP in the thousand genomes set that was in your set. So you either have data that is too sparse or you're using...