Dr. Bruce Hashemian

Results 61 comments of Dr. Bruce Hashemian

Hi @yiheng-wang-nv, thank you very much to raise this issue. Could you please let me know what is the input image that you are using? and also your environment? We...

Thanks, @yiheng-wang-nv. Can you also provide information on your environment? ``` python -c 'import monai; monai.config.print_debug_info()' ```

Hi @yiheng-wang-nv, I have tested the two backend to load `'006388_0.tif'` and the results were the other way around. Can you please check your experiment again? Also be aware of...

@yiheng-wang-nv, can you please run the experiment again with the order of loading reversed? (first cucim and then tifffile) also it would be helpful to provide your environment info. Thanks...

Hi @gigony, @grlee77, Do you know why Yiheng is experiencing slower loading of this tif file using cucim? Thanks

Hi @shaneahmed, Thank you very much for the references. We also were looking into make it compatible with scikit-image operations: https://scikit-image.org/docs/stable/auto_examples/color_exposure/plot_ihc_color_separation.html Also a discussion here: https://github.com/scikit-image/scikit-image/issues/6333 What do you think?

> Hi @drbeh there's a discussion about rearranging the pathology modules into `monai.transforms`, `monai.data` etc, perhaps we can include those changes together within this one? (please see https://github.com/Project-MONAI/MONAI/milestone/36) > >...

@wyli can we have this PR reviewed and merged?

> Hi, we haven't finished the discussions in overall design and naming convention #3868, please could you work on that first? Hi @wyli, I'm not sure how it is related....

> > Hi, we haven't finished the discussions in overall design and naming convention #3868, please could you work on that first? > > Hi @wyli, I'm not sure how...