Dr. Bruce Hashemian

Results 61 comments of Dr. Bruce Hashemian

I'm closing as all the post-processing added. Optimizing the efficiency of these transforms are very important and should be planned for the future releases.

@ericspod any more comments here? Otherwise, we can merge it. Thanks

> Hi @drbeh, as this became a limiting step for me also, I wanted to ask, why not use dask-image functions and dask.map_blocks [here](https://github.com/Project-MONAI/MONAI/blob/10faf465981fa2bc516e06e80644c00b40cd406c/monai/apps/pathology/transforms/post/array.py#L94) multi-thread on CPUs at least? Hi...

Hi @omashkartrx, thanks for sharing your experience. dask should indeed help loading WSI as it is an IO bound operation and we'd appreciate if you feel you can help us...

Hi @Nic-Ma @KumoLiu, the post-processing performance of hovernet is a bottleneck for using hovernet efficiently as reported by users and our usage in MONAI label. Do you think it is...

One approach to try is to replace scikit-image operators with OpenCV, which is what @JHancox has already used. It should give us some speedup since opencv is general much faster...

Hi @omashkartrx, thank you very much for reporting this. We will looks into this. May I know what is the whole slide image that you are using?

@JHancox would it be possible for you to confirm this behavior? Thanks

Hi @Ycblue, Thanks for your contribution. We can continue our communication related to this PR here. Please try to fix the errors that automatic checks are reporting but let me...

Hi @Ycblue, I resolved the conflict that your PR had with the base and merged it. Please pull before making other changes and let us know if you need any...