Beth Cimini

Found in the 4.2.x branch as well as master. Downgrading to wxPython 4.1.0 fixes the issue, so it's a change between 4.1 and 4.2. From Slack > @gnodar01 : I...

Figure out if we're doing standard Zernike features (and if not, what we want to do about it)

1

I was trying to do some cell shape reconstructions from measured Zernike features based on [code I found](https://stackoverflow.com/questions/33193841/image-reconstruction-based-on-zernike-moments-using-mahotas-and-opencv/33339289#33339289), and my reconstructions weren't making sense; in comparing what I was getting...

Illustrate Zernike features in help

1

I got a request after showing the Zernike diagram [that used to be on wikipedia](https://en.wikipedia.org/wiki/File:Zernike_polynomials2.png) at a talk to add it to the CellProfiler documentation. Probably not a bad idea!...

Consistent size mode in SaveCroppedObjects?

1

Would it be helpful (for ML workflows, presumably) to add an option to SaveCroppedObjects to enforce a consistent size on object crops? Right now, they're just "whatever size the object...

Finalize grammar for library functions/modules

2

We have quite a bit of mixed `thisfunction` and `this_function`, let's decide on one (or at least consistently where we used one vs the other) and then go through and...

Good idea? I think it might be.

The documentation for [both](https://numpy.org/doc/stable/reference/generated/numpy.testing.assert_array_almost_equal.html) of [those](https://numpy.org/doc/stable/reference/generated/numpy.testing.assert_almost_equal.html) functions recommends using `assert_allclose` - we have about 200 instances of the former two combined.

Make S3 image handling more analogous to GCS image handling?

2

If you want to download a file from an AWS S3 bucket, the way this currently works is to [generate a presigned url](https://github.com/CellProfiler/core/blob/master/cellprofiler_core/utilities/image.py#L246-L265) ; in contrast, GCS buckets are now...

Finish modernization of the tutorials repo

9

The easiest way to take advantage of the translation workflow we've ported over from bioimagingguide is to rather than build tutorials how we have been up until now (pandoc), we...

Create an EnforceObjectsOneToOne plugin [WIP]

6

Replaces #238 We initially looked at putting this functionality into RunCellpose (#227), and a lot of the pseudocode happened there, but in writing this up I realized that a) it...