Beth Cimini
Beth Cimini
It at least used to be true that we did not enforce/ensure that object numbers in IDPrimary and their child objects from IDSecondary were the same - we used to...
H/T [the forum](https://forum.image.sc/t/cellprofiler-math-domain-error-on-3d-measureobjectsizeshape/73302?u=bcimini) --- User has an issue with MeasureObjectSizeAndShape with one object class in his pipeline - Cells and Nuclei are fine, but if he includes his mitochondria, we...
CellProfiler previously had issues with importing label matrices from other programs that make non-consecutive label matrices (#4485), which we fixed in https://github.com/CellProfiler/core/pull/96 . That introduced a bug, though, which is...
Particularly for OME-TIFF, a lot of times it seems CP (whether due to Bioformats,python-bioformats, Venus being in the 12th house, etc etc) can't actually parse the metadata in a TIFF...
https://github.com/DistributedScience/Distributed-CellProfiler/issues/10
Request from @tischi - it seems like recent versions of `tifffile` support this, so should be relatively fast.
Inspired by [the forum](https://forum.image.sc/t/trackobjects-result-doesnt-reflect-the-change-of-parameters-in-the-module/71313/4?u=bcimini) CorrectIlluminationCalculate has 3 modes it can be used in - "Each" (calculate for each image), "All-First" (before you run the first image, calculate the illumination function...
FilterObjects with multiple object filters is essentially an "AND" gate - objects must pass filter 1 AND filter 2 in order to be kept. There are lots of use cases,...
Multiple forum users have reported that they can't have 4.2.4 installed alongside 4.2.1 and have both versions work on Windows- [see thread](https://forum.image.sc/t/cellprofiler-4-2-4-will-not-open/70674). I'm guessing this is an environment version issue,...