Benjamin Buchfink
Benjamin Buchfink
I'm not sure where you see a bug here. Masking is hard-masking by default, support for soft-masking will be included in the next version.
Hard masking also applies to identical self alignments. Whether that makes sense or not is debatable, but it is not a bug.
Format 102 will do a simple LCA taxonomic annotation of each read, and it's the only way to directly do taxonomic classification with Diamond without using any postprocessing. If you...
May I say that Diamond does not require >100 GB of RAM. I ran it successfully on machines with 4 GB of RAM using the full NR database. Feel free...
Please try the option `--no-unlink` and see if that fixes your problem.
This usually means there's no disk Space, did you check that? Am Donnerstag, 30. April 2015 schrieb agrier04 : > I find that with a query of more than ~30...
Correct, these two options are not supposed to work together.
It seems like Boost is not installed correctly on your system. Try to install it through the package manager and leave out the ` ./install-boost`. There should also be a...
Taxonomy features are not supported by the DAA format. You have to use the tabular format directly (option `-f 6`).
Could you try again using f5daf92d3ece50ebb0c0a5f9b4133769347ec55b? From what I see in the log, there's also still the missing pthreads problem. I did try to compile using the new GCC 9.3.0...