Anton Korobeynikov comments

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                                            Anton Korobeynikov

spades errors: unknown key 'number' / finished abnormally, OS return value: -6

Hello Does the issue reproduce with the latest SPAdes 3.15.5?

system call for: "[]" finished abnormally, OS return value: -9

Hello Your SPAdes job was killed by someone. Likely more information could be found in the system log or probably it would make sense to ask your system administrator.

System call finished abnormally, OS return value: -9

@ditag Please open a separate issue as it could be different from the topic starter.

System call finished abnormally, OS return value: -9

@sclipman It looks like you might be running out of RAM. How much free RAM is available for your SPAdes job?

getting error while running spades.py error : finished abnormally, OS return value: -11

You might hit limit of # of opened files. Likely more information could be found in the system log.

getting error while running spades.py error : finished abnormally, OS return value: -11

> AttributeError: module 'collections' has no attribute 'Hashable' This is a known issue fixed in 3.15.3. 3.13.1 is simply ancient and contains known issues

* system call for: "['/usr/lib/spades/bin/spades-core', '/home/bilsab/esra/tabenoids/FastUniq/source/combined_spades_output_4/K33/configs/config.info']" finished abnormally, err code: -9

Hello Your SPAdes job was killed. I would suggest you to give the latest version a try

Error value:-9 None

Your SPAdes job finished successfully. There is no error in that. Have you attached correct `spades.log` file?

Error value:-9 None

Your SPAdes job was killed. Likely more information could be found in the system log.

Metaviral spades and Iontorrent?

Assigning to metaviralSPAdes author