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System call finished abnormally, OS return value: -9
Description of bug
Thank you for your work on this incredible software. I have enjoyed SPAdes for many years. I am hoping you can help me resolve an error I'm now receiving when trying to run SPAdes on an HPC cluster to assemble 150 bp metagenomic reads.
== Error == system call for: "['/home/sc/Resources/SPAdes-3.15.5-Linux/bin/spades-core', '/home/sc/XF1620/XF1620/K55/configs/config.info', '/home/sc/XF1620/XF1620/K55/configs/mda_mode.info', '/home/sc/XF1620/XF1620/K55/configs/meta_mode.info']" finished abnormally, OS return value: -9
Please find the log and parameter files attached below.
I appreciate any insight!
spades.log
params.txt
SPAdes version
SPAdes v3.15.5
Operating System
Linux-4.18.0-147.el8.x86_64-x86_64-with-centos-8.1.1911-Core
Python Version
Python v3.6.8
Method of SPAdes installation
Linux binary
No errors reported in spades.log
- [X] Yes