Anton Korobeynikov

BinSPreader is a part of source release, but not a part of binary release (it is a separate tool after all). You'd need to build it from source.

> But fyi the (apparently incorrect) BinSPreader binary was present in the SPAdes binary release that I downloaded from Github. Oh, right, sorry, my bad. Then we need to check...

> EDITED: Never mind, I see now that it is DSPADES_ENABLE_PROJECT not SPADES_ENABLE_PROJECT. That seems to have worked. Yes, it is `-DSPADES_ENABLE_PROJECTS="all"`. Looks like the line break might happen in...

The fix should be available as a part of continuous build : https://github.com/ablab/spades/releases/tag/continuous

Hello > 0:07:18.411 2M / 1118M INFO General (kmer_index_builder.hpp : 243) Splitting kmer instances into 500 files using 50 threads. This might take a while. If you'd scale your job...

> make[2]: 离开目录“/home/kxy/SPAdes-3.15.5/build_spades” > make[1]: *** [CMakeFiles/Makefile2:2221：common/utils/CMakeFiles/utils.dir/all] 错误 2 > [ 61%] Building C object ext/hmmer/CMakeFiles/hmmer.dir/src/impl_sse/p7_oprofile.c.o > [ 61%] Building C object ext/hmmer/CMakeFiles/hmmer.dir/src/impl_sse/mpi.c.o > [ 61%] Linking CXX static library...

> I'd like to know if the sutiation is normal, is there possible seeing Spades compelete it or should I run Spades with --only-assembler flag. And I see cpus assigned...

Will you please post `spades.log` files from the both runs?

@krobelus btw, I'm using IlanCosman/tide@v5 as a prompt. So, this might add some delays here and there and expose some races?

> I can't reproduce your issue (either one of them, but we can probaly assume only the second one is relevant). I'm using iTerm 3.5.11 (empty config), fish 4.0.0 (built...