Ruibang Luo

Next generation sequencing reads de novo assembler.

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Clairvoyante: a multi-task convolutional deep neural network for variant calling in Single Molecule Sequencing

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Simultaneous detection of SNPs and Indels using a 16-genotype probabilistic model

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10x Genomics Reads Simulator

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An Artificial Neural Network-based discriminator for validating clinically significant genomic variants

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To tackle the exponentially increasing throughput of Next-Generation Sequencing (NGS), most of the existing short-read aligners can be configured to favor speed in trade of accuracy and sensitivity. S...

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SOAPdenovo-Trans, a de novo transcriptome assembler designed specifically for RNA-Seq. We evaluated its performance on transcriptome datasets from rice and mouse.

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