Anita Caron

Replace `owltools --expand-macros` with `robot expand`

13

After adding `robot expand`, it detected the misuse of the `present_in_taxon` annotation, which expects a resource but was passed a string. The cases are in `CL_import.owl`. The 15 cases are:...

The great base debugging

21

EDIT: these unsats are not the problem anymore, look at my comment below. ## [neuroblast](http://purl.obolibrary.org/obo/CL_0000031) SubClassOf [Nothing](http://www.w3.org/2002/07/owl#Nothing) ## - [neuroblast](http://purl.obolibrary.org/obo/CL_0000031) SubClassOf [neuronal stem cell](http://purl.obolibrary.org/obo/CL_0000047) - [neuronal stem cell](http://purl.obolibrary.org/obo/CL_0000047) SubClassOf [part...

UBERON base approach

2

Fixes #2094

Replace the use of innervates for ganglia with `extends_fibers_into`

13

* I think we could replace the use of innervates for ganglia with 'extends_fibers_into', preserving use of innervates for neuron projection bundles (tracts and nerves) - although I guess that...

Logical axioms from external relationships found in edit file

17

After I did cleansing in #2377, some logical axioms are only present in UBERON. [Typedef] id: capable_of name: capable of xref: RO:0002215 is_a: functionally_related_to ! functionally related to [Typedef] id:...

Revert orcid-contributor-violation https check (do not merge)

1

Fixes #2318

Fix logical axioms from external relationships

2

Fixes #2453

Add classification to `simultaneous with`

4

Related to https://github.com/obophenotype/uberon/issues/2453

Fixes #703

Fixes #671