Anita Caron

In the last OBO Dashboard release (2024-04-25), RO failed caused by some bug in the dashboard code. https://github.com/OBOFoundry/obo-dash.github.io/blob/c60edc54845c0a693cbc5bb75ab0be30fc2720a1/dashboard/ro/dashboard.yml#L6-L8

Pipeline only works if there is one of each error types resulting from the ontologies in `dashboard-config.yml`

1

The pipeline expects at least 2-3 ontologies to be added. EDIT: As a workaround, add ``` - id: tmp mirror_from: "https://raw.githubusercontent.com/monarch-ebi-dev/robot_tests/master/custom-dashboard.owl" ``` as an ontology to your config.

Fixes #123

Error when installing via oaklib: subprocess-exited-with-error

1

I tried installing oak versions 0.1.32-0.1.36 and got this error for each. ```shell Collecting fastobo~=0.12.1 Using cached fastobo-0.12.1.tar.gz (20.1 MB) Installing build dependencies ... done Getting requirements to build wheel...

Term pages loading but ending completely blank

1

The page loads, but the tree view is still processing; the page turns blank. Some examples: https://www.ebi.ac.uk/ols4/ontologies/uberon/classes/http%253A%252F%252Fpurl.obolibrary.org%252Fobo%252FUBERON_0001012 https://www.ebi.ac.uk/ols4/ontologies/uberon/classes/http%253A%252F%252Fpurl.obolibrary.org%252Fobo%252FUBERON_0010853 https://www.ebi.ac.uk/ols4/ontologies/uberon/classes/http%253A%252F%252Fpurl.obolibrary.org%252Fobo%252FUBERON_0000144 https://www.ebi.ac.uk/ols4/ontologies/uberon/classes/http%253A%252F%252Fpurl.obolibrary.org%252Fobo%252FUBERON_0006801 https://www.ebi.ac.uk/ols4/ontologies/uberon/classes/http%253A%252F%252Fpurl.obolibrary.org%252Fobo%252FUBERON_0004411

Contributors is not showing

4

From issue #301, it was added the metadata for the ORCID, however now seeing the page for [CL:4030022](https://www.ebi.ac.uk/ols4/ontologies/cl/classes/http%253A%252F%252Fpurl.obolibrary.org%252Fobo%252FCL_4030022), the contributor only shows a comma, and if you hover the mouse...

Properties with non-standard OBO identifier structures

3

Some of these properties exist in RO or can be moved there. Otherwise, they should be replaced with numeric identifiers. http://purl.obolibrary.org/obo/uberon/core#anastomoses_with http://purl.obolibrary.org/obo/uberon/core#anteriorly_connected_to http://purl.obolibrary.org/obo/uberon/core#channel_for http://purl.obolibrary.org/obo/uberon/core#distally_connected_to http://purl.obolibrary.org/obo/uberon/core#extends_fibers_into http://purl.obolibrary.org/obo/uberon/core#filtered_through http://purl.obolibrary.org/obo/uberon/core#has_start http://purl.obolibrary.org/obo/uberon/core#in_innermost_side_of http://purl.obolibrary.org/obo/uberon/core#in_outermost_side_of http://purl.obolibrary.org/obo/uberon/core#indirectly_supplies...

Replace date annotation to `xsd:dateTime` instead of `xsd:string`

2

- [ ] Add post process in the pipeline to change the range in date type annotations. - [ ] Add QC to verify all annotations related to date use...