Alan O'Callaghan

Yeah, this is being worked on atm so don't close.

Interesting application, thanks for getting in touch! This isn't something that is directly possible at the moment, but it could probably be made to happen with a little bit of...

Probably the first thing to do is to create a working prototype. I'll add this in a further comment. The way heatmaply works internally is to first run `heatmapr` on...

```r library("plotly") library("heatmaply") library("dendextend") dists

I'd be interested in seeing some examples. Perhaps it's too complex to merge to heatmaply, but it may be nice to develop as a separate package.

Sorry, it looks like varying tick text colour isn't possible in plotly at the moment. See the example code: ```r library("plotly") ## Works plot_ly(mtcars) %>% add_markers(~cyl, ~gear) %>% layout( xaxis=list(...

That is correct, I believe that is not possible. The point of the code I posted was to demonstrate (mainly for myself if I come back to this later) that...

I don't know if this is properly supported in plotly as of right now: ```r library(ggplot2) library(plotly) g

Can you provide a concrete example of what you want to accomplish (eg in ComplexHeatmap code). I suspect the answer is, "no and it would be too difficult to implement"....

Scaling in heatmap.2 is applied after calculating dendrograms, in heatmaply scaling happens before. I prefer the heatmaply behaviour as otherwise there's a mismatch in the data and clustering. You can...