Alex H. Wagner, PhD
Alex H. Wagner, PhD
### Discussed in https://github.com/ga4gh/vrs/discussions/461 Originally posted by @ahwagner in https://github.com/ga4gh/vrs/discussions/461#discussioncomment-8833511 A draft model of 4 proposed changes between VRS 1.x to 2.x to support structural variation: 1. The Haplotype class...
- [x] Reorganize Index (#482) - [x] Update Allele (#484) - [x] Update SequenceLocation (#483) - [x] Create SequenceReference (#485) - [x] Create Adjacency (#488) - [x] Update Haplotype to...
Per ga4gh/gks-core#82, there will be a rename for the repo structure and a reorg of schema locations, update accordingly.
Addresses #567 and #568. For discussion.
From #533: > Please add a figure showing the class hierarchy to illustrate inheritance. This would be especially helpful for an abstract class like Location, which is listed as a...
Discuss the nature of sequence strand conventions and orientation. Link between Alleles and Adjacencies, and the use of Traversal blocks in Derivative Molecules for adding orientation to Adjacencies in event...
Add decision record entries for: - [ ] IRIs over CURIEs - [ ] VRS identifier syntax and versioning - [ ] GA4GH Digest Keys over value objects
A high-level overview of major new features in VRS 2.0 would help with orientation. Create documentation for the following major new features: - [ ] Descriptive metadata - [x] GA4GH...
Create an appendix covering stability, benefits, and risks of VRS digests. Link this to maturity model documentation created in #565.
Currently the `ga4gh` field info may be found in schema, but not in docs. Update the metaschema processor tooling to include this information when available.