Adam Tyson
Adam Tyson
movement relies on pyproj which only has ARM wheels for macOS 14: https://pypi.org/project/pyproj/#files On my system (macOS 13), movement fails to install with pip, but works with conda. I don't...
Based on this image.sc issue: https://forum.image.sc/t/heatmap-3d-visualization-of-brain-region-transparency-regulation/ It's possible to do, but it would be easier to add this as a parameter somehow Example: ```python import brainglobe_heatmap as bgh values =...
Adding a new atlas to BrainGlobe is a nice way for new contributors to get started. We have lots of open `new-atlas` issues, but no sense for potential contributors which...
In the case of atlases with license restrictions (e.g. non-commercial), do we: - Not add them - Add them but document the license terms - Add them but document the...
See https://ebrains.eu/data-tools-services/brain-atlases The Waxholm and Allen are already in. We would need the human and macaque (https://github.com/brainglobe/brainglobe-atlasapi/issues/377). Some of these are more complex, e.g. multiple reference & annotations. Would be...
Paper: https://doi.org/10.1038/s41586-025-09211-8 Website: https://atlas.brainsmatics.cn/STAM This atlas is at 1um resolution, so is likely huge. I'm also not sure if the raw atlas is available either. No rush to add this,...