Andrea Ariani

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icon company BASF icon location Gent, Belgium

Results 3 issues of Andrea Ariani

Reference calls with no support and missing calls

Dear, thanks a lot for developing this tool. I already found between the issues that sometimes svtyper reports REF calls without support (`10/0:0:4.77:0,0,0:0:0:0:0:0:0:0:0:0:0:.`) when there are no reads aligning in...

Samtools CSI index

3 comment

Hi, thanks a lot for the development of this tool. I am trying to use smoove for a triticum genome and the program give an error saying that it cannot...

-M parameter for BWA MEM alignment

Thanks a lot for developing this pipeline. I have a question about BWA MEM alignment. In your [main paper](https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4589466/) you mention that: `SpeedSeq aligns paired-end FASTQ files to the human...