svtyper
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Reference calls with no support and missing calls
Dear,
thanks a lot for developing this tool. I already found between the issues that sometimes svtyper reports REF calls without support (10/0:0:4.77:0,0,0:0:0:0:0:0:0:0:0:0:0:.
) when there are no reads aligning in a region (as described in #65 ).
However in my results I can also find missing calls ( ./.:.:.:.:0:0:0:0:0:0:0:0:0:0:.
). What's the difference between the 2 type of calls?