Agustin Baricalla

Hello!! I'm starting to work with Masurca and I have some questions about the SLURM node usage. I'm currently working with an insect genome that has approximately 1 Gbp in...

I was using Snippy and I recommend the use of this software. Great Job! When I ran it with a reference in gbk file format Snippy split it into Fasta+GTF...

Hi! I'm currently using Redundans, but when I was testing it I found that the Gapcloser step doesn't use the multithread option even when the option is provided. Any suggestion?...

[redundans](https://github.com/lpryszcz/redundans) is a pipeline that assists the assembly of heterozygous genomes. Also has a conda package: " conda install -c genomedk redundans "

Hi! I was working with old genomic data produced by Illumina Mate pair sequencing. This strategy cuts linear intrachromosomal regions in 3kb, 5kb, 8kb, or 20kb segments, ligate, circularizes the...

Minimap2 option

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Hi there!! I would like to know if there is any chance to add the following option to the **"advanced output options"** in Minimap2 (version >= 2.17). Minimap2 has an...

Summary file output

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Hi @huangnengCSU ! This tool is amazing, I was using it for a few genomes in the lab but I noticed that the "summary.txt" is overwritten if you run twice...