Lilin Yin
Did you source the online version of CMplot? In the new version, there is a new parameter 'multraits=T' to control the output of multiple traits plot.
Hi, thank you for the feedback. Sorry that the highlight function for SNP names or gene names is now only available to traditional rectangular-Manhattan plot.
Thank you for the feedback. And sorry for the confusing results generated from CMplot. The difference between the two plots is caused by the different data attached in CMplot. The...
Sorry, there are no parameters to set the symbol '>' in the new version of CMplot.
Sorry that CMplot can only visualize the distribution of markers across entire genome, it's not available to plot a local section.
It can be achieved by using the arguments 'threshold' and 'signal.col': 1. transform the format of example data as the same with yours: > cattle50K[,4:ncol(cattle50K)] CMplot(cattle50K,plot.type="m",threshold=c(-10,0),signal.col=c("blue","red"),LOG10=F) Note that the lower...