ENIGMA

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Dear Developer Hello, thank you for developing a great algorithm. Using the algorithm you developed, I deconvolved the bulk RNA sequencing data I have to find pseudo - cell type...

mybioinformatics

CTS-DE Analysis

4

Thank you so much for designing this wonderful program. For the Cell Type Specific Differential Expression (CTS-DE) Analysis could you please offer more context for setting this up after normalizing...

GUnit-Lab

L2 Norm Method - Query

3

Hello, Thank you for making this code available for use. I am new to this kind of work and had 2 queries: **1.** I was exploring the code to make...

Kurious-HG

Any way to speed up the calculation?

2

Hi, I've tried to run Enigma trace norm for ~500 TCGA samples using my own scRNA data (15 cell types with ~ 10000 genes) as the reference (in the aggregated...

Yun-Ching-Chen

Hi, First of all I'd like to thank you for the tool, I find it really helpful as it addresses key challenge while using bulk data. I'm trying to reproduce...

vshre

Error in rowSums(Ma) : 'x' must be an array of at least two dimensions

2

Hi, Thank you for this package. I have been looking for something like this. I tried to use this with my data but I got the following error. ``` Error...

nfancy

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