Catalyst.jl
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LoadError: AssertionError: @parameters expects a tuple of expressions or an expression of a tuple
Describe the bug 🐞
Hello, I can not use complex naming for my variables (more than a letter) in a @reaction_network if the @parameters is encased in a begin end. It is quite an inconvenience for larger models in which I would like to use variables with explicit naming in a human-readable way.
Expected behavior
To work in all the following examples and allow larger names than a single letter.
Minimal Reproducible Example 👇
using Catalyst
mock0 = @reaction_network test0 begin # work
@parameters begin
a = 1
b = 2
c
end
a, A --> B
b, B --> A
end
mock1 = @reaction_network test1 begin #ERROR: LoadError: AssertionError: @parameters expects a tuple of expressions or an expression of a tuple (`@parameters x y z(t) v[1:3] w[1:2,1:4]` or `@parameters x y z(t) v[1:3] w[1:2,1:4] k=1.0`)
@parameters begin
doesnotwork = 25.0
b = 0
c = 0
end
a, A --> B
b, B --> A
end
mock2 = @reaction_network test2 begin #ERROR: LoadError: AssertionError: @parameters expects a tuple of expressions or an expression of a tuple (`@parameters x y z(t) v[1:3] w[1:2,1:4]` or `@parameters x y z(t) v[1:3] w[1:2,1:4] k=1.0`)
@parameters begin
a = 25.0
b = 0
c = 0
end
doesnotwork, A --> B
b, B --> A
end
mock3 = @reaction_network test3 begin # woek
@parameters a = 25.0 b = 0 c = 0
doesnotwork, A --> B
b, B --> A
end
mock4 = @reaction_network test4 begin #ERROR: LoadError: AssertionError: @parameters expects a tuple of expressions or an expression of a tuple (`@parameters x y z(t) v[1:3] w[1:2,1:4]` or `@parameters x y z(t) v[1:3] w[1:2,1:4] k=1.0`)
@parameters begin
doesnotwork
b
c
end
a, A --> B
b, B --> A
end
Error & Stacktrace ⚠️
ERROR: LoadError: AssertionError: @parameters expects a tuple of expressions or an expression of a tuple (`@parameters x y z(t) v[1:3] w[1:2,1:4]` or `@parameters x y z(t) v[1:3] w[1:2,1:4] k=1.0`)
Stacktrace:
[1] _parse_vars(macroname::Symbol, type::Type, x::Tuple{Expr, Symbol}, transform::Function)
@ Symbolics ~/.julia/packages/Symbolics/xD5Pj/src/variable.jl:166
[2] var"@parameters"(__source__::LineNumberNode, __module__::Module, xs::Vararg{Any})
@ ModelingToolkit ~/.julia/packages/ModelingToolkit/udKhl/src/parameters.jl:76
[3] eval(m::Module, e::Any)
@ Core ./boot.jl:489
in expression starting at <macrocall>:0
Environment (please complete the following information):
- Output of
using Pkg; Pkg.status()
[479239e8] Catalyst v15.0.8
[a93c6f00] DataFrames v1.8.1
[23fbe1c1] Latexify v0.16.10
[429524aa] Optim v1.13.2
[48d54b35] PEtab v3.10.3
[91a5bcdd] Plots v1.41.1
[f3b207a7] StatsPlots v0.15.8
⌃ [220ca800] StructuralIdentifiability v0.5.14
- Output of
using Pkg; Pkg.status(; mode = PKGMODE_MANIFEST)
[47edcb42] ADTypes v1.18.0
⌅ [c3fe647b] AbstractAlgebra v0.44.13
[621f4979] AbstractFFTs v1.5.0
[1520ce14] AbstractTrees v0.4.5
[7d9f7c33] Accessors v0.1.42
[79e6a3ab] Adapt v4.4.0
[66dad0bd] AliasTables v1.1.3
[ec485272] ArnoldiMethod v0.4.0
[7d9fca2a] Arpack v0.5.4
[4fba245c] ArrayInterface v7.22.0
[4c555306] ArrayLayouts v1.12.0
[a9b6321e] Atomix v1.1.2
[13072b0f] AxisAlgorithms v1.1.0
[e2ed5e7c] Bijections v0.2.2
[d1d4a3ce] BitFlags v0.1.9
[62783981] BitTwiddlingConvenienceFunctions v0.1.6
[8e7c35d0] BlockArrays v1.9.1
⌃ [70df07ce] BracketingNonlinearSolve v1.4.0
[fa961155] CEnum v0.5.0
[2a0fbf3d] CPUSummary v0.2.7
[336ed68f] CSV v0.10.15
[479239e8] Catalyst v15.0.8
[d360d2e6] ChainRulesCore v1.26.0
[fb6a15b2] CloseOpenIntervals v0.1.13
[aaaa29a8] Clustering v0.15.8
[944b1d66] CodecZlib v0.7.8
[35d6a980] ColorSchemes v3.31.0
[3da002f7] ColorTypes v0.12.1
[c3611d14] ColorVectorSpace v0.11.0
[5ae59095] Colors v0.13.1
⌅ [861a8166] Combinatorics v1.0.2
[a80b9123] CommonMark v0.9.1
[38540f10] CommonSolve v0.2.4
[bbf7d656] CommonSubexpressions v0.3.1
[f70d9fcc] CommonWorldInvalidations v1.0.0
[34da2185] Compat v4.18.1
[b0b7db55] ComponentArrays v0.15.30
[b152e2b5] CompositeTypes v0.1.4
[a33af91c] CompositionsBase v0.1.2
[2569d6c7] ConcreteStructs v0.2.3
[f0e56b4a] ConcurrentUtilities v2.5.0
[187b0558] ConstructionBase v1.6.0
[d38c429a] Contour v0.6.3
[adafc99b] CpuId v0.3.1
[a8cc5b0e] Crayons v4.1.1
[9a962f9c] DataAPI v1.16.0
[a93c6f00] DataFrames v1.8.1
⌅ [864edb3b] DataStructures v0.18.22
[e2d170a0] DataValueInterfaces v1.0.0
[8bb1440f] DelimitedFiles v1.9.1
[2b5f629d] DiffEqBase v6.190.2
[459566f4] DiffEqCallbacks v4.10.1
[77a26b50] DiffEqNoiseProcess v5.24.1
[163ba53b] DiffResults v1.1.0
[b552c78f] DiffRules v1.15.1
⌅ [a0c0ee7d] DifferentiationInterface v0.6.54
[8d63f2c5] DispatchDoctor v0.4.26
[b4f34e82] Distances v0.10.12
[31c24e10] Distributions v0.25.122
[ffbed154] DocStringExtensions v0.9.5
[5b8099bc] DomainSets v0.7.16
⌃ [7c1d4256] DynamicPolynomials v0.6.3
[06fc5a27] DynamicQuantities v1.10.0
[4e289a0a] EnumX v1.0.5
[f151be2c] EnzymeCore v0.8.15
[460bff9d] ExceptionUnwrapping v0.1.11
[e2ba6199] ExprTools v0.1.10
[55351af7] ExproniconLite v0.10.14
[c87230d0] FFMPEG v0.4.5
[7a1cc6ca] FFTW v1.10.0
[7034ab61] FastBroadcast v0.3.5
[9aa1b823] FastClosures v0.3.2
[a4df4552] FastPower v1.2.0
[48062228] FilePathsBase v0.9.24
[1a297f60] FillArrays v1.14.0
[64ca27bc] FindFirstFunctions v1.4.2
[6a86dc24] FiniteDiff v2.29.0
[53c48c17] FixedPointNumbers v0.8.5
[1fa38f19] Format v1.3.7
⌅ [f6369f11] ForwardDiff v0.10.39
[069b7b12] FunctionWrappers v1.1.3
[77dc65aa] FunctionWrappersWrappers v0.1.3
[d9f16b24] Functors v0.5.2
[46192b85] GPUArraysCore v0.2.0
[28b8d3ca] GR v0.73.18
[c27321d9] Glob v1.3.1
[86223c79] Graphs v1.13.1
[42e2da0e] Grisu v1.0.2
⌅ [0b43b601] Groebner v0.9.5
[cd3eb016] HTTP v1.10.19
[34004b35] HypergeometricFunctions v0.3.28
[615f187c] IfElse v0.1.1
[d25df0c9] Inflate v0.1.5
[842dd82b] InlineStrings v1.4.5
[18e54dd8] IntegerMathUtils v0.1.3
[a98d9a8b] Interpolations v0.16.2
[8197267c] IntervalSets v0.7.11
[3587e190] InverseFunctions v0.1.17
[41ab1584] InvertedIndices v1.3.1
[92d709cd] IrrationalConstants v0.2.6
[c8e1da08] IterTools v1.10.0
[82899510] IteratorInterfaceExtensions v1.0.0
[1019f520] JLFzf v0.1.11
[692b3bcd] JLLWrappers v1.7.1
[682c06a0] JSON v1.2.0
[ae98c720] Jieko v0.2.1
[98e50ef6] JuliaFormatter v2.2.0
⌅ [70703baa] JuliaSyntax v0.4.10
[ccbc3e58] JumpProcesses v9.19.1
[5ab0869b] KernelDensity v0.6.10
[ba0b0d4f] Krylov v0.10.2
[b964fa9f] LaTeXStrings v1.4.0
[23fbe1c1] Latexify v0.16.10
[73f95e8e] LatticeRules v0.0.1
[10f19ff3] LayoutPointers v0.1.17
[5078a376] LazyArrays v2.8.0
[87fe0de2] LineSearch v0.1.4
[d3d80556] LineSearches v7.4.0
[7ed4a6bd] LinearSolve v3.46.1
[2ab3a3ac] LogExpFunctions v0.3.29
[e6f89c97] LoggingExtras v1.2.0
[d8e11817] MLStyle v0.4.17
[1914dd2f] MacroTools v0.5.16
[d125e4d3] ManualMemory v0.1.8
[bb5d69b7] MaybeInplace v0.1.4
[739be429] MbedTLS v1.1.9
[442fdcdd] Measures v0.3.3
[e1d29d7a] Missings v1.2.0
⌅ [961ee093] ModelingToolkit v9.80.1
[2e0e35c7] Moshi v0.3.7
[46d2c3a1] MuladdMacro v0.2.4
⌃ [102ac46a] MultivariatePolynomials v0.5.9
[6f286f6a] MultivariateStats v0.10.3
[d8a4904e] MutableArithmetics v1.6.7
[d41bc354] NLSolversBase v7.10.0
[77ba4419] NaNMath v1.1.3
[b8a86587] NearestNeighbors v0.4.22
⌅ [2edaba10] Nemo v0.49.5
⌃ [8913a72c] NonlinearSolve v4.10.0
⌅ [be0214bd] NonlinearSolveBase v1.16.1
⌃ [5959db7a] NonlinearSolveFirstOrder v1.8.0
⌃ [9a2c21bd] NonlinearSolveQuasiNewton v1.9.0
⌃ [26075421] NonlinearSolveSpectralMethods v1.4.0
[510215fc] Observables v0.5.5
[6fe1bfb0] OffsetArrays v1.17.0
[4d8831e6] OpenSSL v1.6.0
[429524aa] Optim v1.13.2
[bac558e1] OrderedCollections v1.8.1
[6ad6398a] OrdinaryDiffEqBDF v1.10.1
[bbf590c4] OrdinaryDiffEqCore v1.36.0
[4302a76b] OrdinaryDiffEqDifferentiation v1.16.1
⌃ [127b3ac7] OrdinaryDiffEqNonlinearSolve v1.14.1
[43230ef6] OrdinaryDiffEqRosenbrock v1.18.1
[2d112036] OrdinaryDiffEqSDIRK v1.7.0
[90014a1f] PDMats v0.11.36
[48d54b35] PEtab v3.10.3
[3e851597] ParamPunPam v0.5.5
[d96e819e] Parameters v0.12.3
[69de0a69] Parsers v2.8.3
[ccf2f8ad] PlotThemes v3.3.0
[995b91a9] PlotUtils v1.4.4
[91a5bcdd] Plots v1.41.1
[e409e4f3] PoissonRandom v0.4.7
[f517fe37] Polyester v0.7.18
[1d0040c9] PolyesterWeave v0.2.2
[2dfb63ee] PooledArrays v1.4.3
[85a6dd25] PositiveFactorizations v0.2.4
[d236fae5] PreallocationTools v0.4.34
[aea7be01] PrecompileTools v1.3.3
[21216c6a] Preferences v1.5.0
[08abe8d2] PrettyTables v3.1.0
[27ebfcd6] Primes v0.5.7
[92933f4c] ProgressMeter v1.11.0
[43287f4e] PtrArrays v1.3.0
[1fd47b50] QuadGK v2.11.2
[8a4e6c94] QuasiMonteCarlo v0.3.3
[74087812] Random123 v1.7.1
[fb686558] RandomExtensions v0.4.4
[e6cf234a] RandomNumbers v1.6.0
[c84ed2f1] Ratios v0.4.5
[b4db0fb7] ReactionNetworkImporters v0.16.1
[3cdcf5f2] RecipesBase v1.3.4
[01d81517] RecipesPipeline v0.6.12
[731186ca] RecursiveArrayTools v3.39.0
[189a3867] Reexport v1.2.2
[05181044] RelocatableFolders v1.0.1
[ae029012] Requires v1.3.1
[ae5879a3] ResettableStacks v1.1.1
[37e2e3b7] ReverseDiff v1.16.1
[79098fc4] Rmath v0.9.0
[7e49a35a] RuntimeGeneratedFunctions v0.5.16
[e5567a89] SBML v1.6.0
[210efffb] SBMLImporter v3.1.0
[9dfe8606] SCCNonlinearSolve v1.6.0
[94e857df] SIMDTypes v0.1.0
[0bca4576] SciMLBase v2.124.0
[19f34311] SciMLJacobianOperators v0.1.11
[a6db7da4] SciMLLogging v1.3.1
[c0aeaf25] SciMLOperators v1.10.0
[431bcebd] SciMLPublic v1.0.0
[53ae85a6] SciMLStructures v1.7.0
[6c6a2e73] Scratch v1.3.0
[91c51154] SentinelArrays v1.4.8
[efcf1570] Setfield v1.1.2
[992d4aef] Showoff v1.0.3
[777ac1f9] SimpleBufferStream v1.2.0
⌃ [727e6d20] SimpleNonlinearSolve v2.7.0
[699a6c99] SimpleTraits v0.9.5
[ce78b400] SimpleUnPack v1.1.0
[ed01d8cd] Sobol v1.5.0
[a2af1166] SortingAlgorithms v1.2.2
[0a514795] SparseMatrixColorings v0.4.23
[276daf66] SpecialFunctions v2.6.1
[860ef19b] StableRNGs v1.0.3
[aedffcd0] Static v1.3.1
[0d7ed370] StaticArrayInterface v1.8.0
[90137ffa] StaticArrays v1.9.15
[1e83bf80] StaticArraysCore v1.4.4
[10745b16] Statistics v1.11.1
[82ae8749] StatsAPI v1.7.1
[2913bbd2] StatsBase v0.34.7
[4c63d2b9] StatsFuns v1.5.2
[f3b207a7] StatsPlots v0.15.8
[7792a7ef] StrideArraysCore v0.5.8
[69024149] StringEncodings v0.3.7
[892a3eda] StringManipulation v0.4.1
[ec057cc2] StructUtils v2.5.1
⌃ [220ca800] StructuralIdentifiability v0.5.14
⌅ [c3572dad] Sundials v4.28.0
[2efcf032] SymbolicIndexingInterface v0.3.46
⌃ [19f23fe9] SymbolicLimits v0.2.3
⌅ [d1185830] SymbolicUtils v3.32.0
[0c5d862f] Symbolics v6.57.0
[ab02a1b2] TableOperations v1.2.0
[3783bdb8] TableTraits v1.0.1
[bd369af6] Tables v1.12.1
[ed4db957] TaskLocalValues v0.1.3
[62fd8b95] TensorCore v0.1.1
[8ea1fca8] TermInterface v2.0.0
[1c621080] TestItems v1.0.0
[8290d209] ThreadingUtilities v0.5.5
[a759f4b9] TimerOutputs v0.5.29
[3bb67fe8] TranscodingStreams v0.11.3
[410a4b4d] Tricks v0.1.13
[781d530d] TruncatedStacktraces v1.4.0
[5c2747f8] URIs v1.6.1
[3a884ed6] UnPack v1.0.2
[1cfade01] UnicodeFun v0.4.1
[1986cc42] Unitful v1.25.1
[a7c27f48] Unityper v0.1.6
[013be700] UnsafeAtomics v0.3.0
[41fe7b60] Unzip v0.2.0
[ea10d353] WeakRefStrings v1.4.2
[cc8bc4a8] Widgets v0.6.7
[efce3f68] WoodburyMatrices v1.0.0
[76eceee3] WorkerUtilities v1.6.1
[ddb6d928] YAML v0.4.15
⌅ [68821587] Arpack_jll v3.5.1+1
[6e34b625] Bzip2_jll v1.0.9+0
[83423d85] Cairo_jll v1.18.5+0
[ee1fde0b] Dbus_jll v1.16.2+0
[2702e6a9] EpollShim_jll v0.0.20230411+1
[2e619515] Expat_jll v2.7.3+0
[b22a6f82] FFMPEG_jll v8.0.0+0
[f5851436] FFTW_jll v3.3.11+0
⌅ [e134572f] FLINT_jll v300.200.201+0
[a3f928ae] Fontconfig_jll v2.17.1+0
[d7e528f0] FreeType2_jll v2.13.4+0
[559328eb] FriBidi_jll v1.0.17+0
[0656b61e] GLFW_jll v3.4.0+2
[d2c73de3] GR_jll v0.73.18+0
[b0724c58] GettextRuntime_jll v0.22.4+0
[61579ee1] Ghostscript_jll v9.55.1+0
[7746bdde] Glib_jll v2.86.0+0
[3b182d85] Graphite2_jll v1.3.15+0
[2e76f6c2] HarfBuzz_jll v8.5.1+0
[1d5cc7b8] IntelOpenMP_jll v2025.2.0+0
[aacddb02] JpegTurbo_jll v3.1.3+0
[c1c5ebd0] LAME_jll v3.100.3+0
[88015f11] LERC_jll v4.0.1+0
[1d63c593] LLVMOpenMP_jll v18.1.8+0
[dd4b983a] LZO_jll v2.10.3+0
[e9f186c6] Libffi_jll v3.4.7+0
[7e76a0d4] Libglvnd_jll v1.7.1+1
[94ce4f54] Libiconv_jll v1.18.0+0
[4b2f31a3] Libmount_jll v2.41.2+0
[89763e89] Libtiff_jll v4.7.2+0
[38a345b3] Libuuid_jll v2.41.2+0
[856f044c] MKL_jll v2025.2.0+0
[c8ffd9c3] MbedTLS_jll v2.28.10+0
[e7412a2a] Ogg_jll v1.3.6+0
[656ef2d0] OpenBLAS32_jll v0.3.29+0
[efe28fd5] OpenSpecFun_jll v0.5.6+0
[91d4177d] Opus_jll v1.5.2+0
[36c8627f] Pango_jll v1.56.4+0
⌅ [30392449] Pixman_jll v0.44.2+0
[c0090381] Qt6Base_jll v6.8.2+2
[629bc702] Qt6Declarative_jll v6.8.2+1
[ce943373] Qt6ShaderTools_jll v6.8.2+1
[e99dba38] Qt6Wayland_jll v6.8.2+2
[f50d1b31] Rmath_jll v0.5.1+0
[bb12108a] SBML_jll v5.20.1+0
⌅ [fb77eaff] Sundials_jll v5.2.3+0
[a44049a8] Vulkan_Loader_jll v1.3.243+0
[a2964d1f] Wayland_jll v1.24.0+0
⌅ [02c8fc9c] XML2_jll v2.13.9+0
[ffd25f8a] XZ_jll v5.8.1+0
[f67eecfb] Xorg_libICE_jll v1.1.2+0
[c834827a] Xorg_libSM_jll v1.2.6+0
[4f6342f7] Xorg_libX11_jll v1.8.12+0
[0c0b7dd1] Xorg_libXau_jll v1.0.13+0
[935fb764] Xorg_libXcursor_jll v1.2.4+0
[a3789734] Xorg_libXdmcp_jll v1.1.6+0
[1082639a] Xorg_libXext_jll v1.3.7+0
[d091e8ba] Xorg_libXfixes_jll v6.0.2+0
[a51aa0fd] Xorg_libXi_jll v1.8.3+0
[d1454406] Xorg_libXinerama_jll v1.1.6+0
[ec84b674] Xorg_libXrandr_jll v1.5.5+0
[ea2f1a96] Xorg_libXrender_jll v0.9.12+0
[c7cfdc94] Xorg_libxcb_jll v1.17.1+0
[cc61e674] Xorg_libxkbfile_jll v1.1.3+0
[e920d4aa] Xorg_xcb_util_cursor_jll v0.1.6+0
[12413925] Xorg_xcb_util_image_jll v0.4.1+0
[2def613f] Xorg_xcb_util_jll v0.4.1+0
[975044d2] Xorg_xcb_util_keysyms_jll v0.4.1+0
[0d47668e] Xorg_xcb_util_renderutil_jll v0.3.10+0
[c22f9ab0] Xorg_xcb_util_wm_jll v0.4.2+0
[35661453] Xorg_xkbcomp_jll v1.4.7+0
[33bec58e] Xorg_xkeyboard_config_jll v2.44.0+0
[c5fb5394] Xorg_xtrans_jll v1.6.0+0
[3161d3a3] Zstd_jll v1.5.7+1
[35ca27e7] eudev_jll v3.2.14+0
[214eeab7] fzf_jll v0.61.1+0
[a4ae2306] libaom_jll v3.13.1+0
[0ac62f75] libass_jll v0.17.4+0
[1183f4f0] libdecor_jll v0.2.2+0
[2db6ffa8] libevdev_jll v1.13.4+0
[f638f0a6] libfdk_aac_jll v2.0.4+0
[36db933b] libinput_jll v1.28.1+0
[b53b4c65] libpng_jll v1.6.50+0
[f27f6e37] libvorbis_jll v1.3.8+0
[009596ad] mtdev_jll v1.1.7+0
[1317d2d5] oneTBB_jll v2022.0.0+1
[1270edf5] x264_jll v10164.0.1+0
[dfaa095f] x265_jll v4.1.0+0
[d8fb68d0] xkbcommon_jll v1.9.2+0
[0dad84c5] ArgTools v1.1.2
[56f22d72] Artifacts v1.11.0
[2a0f44e3] Base64 v1.11.0
[ade2ca70] Dates v1.11.0
[8ba89e20] Distributed v1.11.0
[f43a241f] Downloads v1.6.0
[7b1f6079] FileWatching v1.11.0
[9fa8497b] Future v1.11.0
[b77e0a4c] InteractiveUtils v1.11.0
[ac6e5ff7] JuliaSyntaxHighlighting v1.12.0
[4af54fe1] LazyArtifacts v1.11.0
[b27032c2] LibCURL v0.6.4
[76f85450] LibGit2 v1.11.0
[8f399da3] Libdl v1.11.0
[37e2e46d] LinearAlgebra v1.12.0
[56ddb016] Logging v1.11.0
[d6f4376e] Markdown v1.11.0
[a63ad114] Mmap v1.11.0
[ca575930] NetworkOptions v1.3.0
[44cfe95a] Pkg v1.12.0
[de0858da] Printf v1.11.0
[3fa0cd96] REPL v1.11.0
[9a3f8284] Random v1.11.0
[ea8e919c] SHA v0.7.0
[9e88b42a] Serialization v1.11.0
[1a1011a3] SharedArrays v1.11.0
[6462fe0b] Sockets v1.11.0
[2f01184e] SparseArrays v1.12.0
[f489334b] StyledStrings v1.11.0
[4607b0f0] SuiteSparse
[fa267f1f] TOML v1.0.3
[a4e569a6] Tar v1.10.0
[8dfed614] Test v1.11.0
[cf7118a7] UUIDs v1.11.0
[4ec0a83e] Unicode v1.11.0
[e66e0078] CompilerSupportLibraries_jll v1.3.0+1
[781609d7] GMP_jll v6.3.0+2
[deac9b47] LibCURL_jll v8.11.1+1
[e37daf67] LibGit2_jll v1.9.0+0
[29816b5a] LibSSH2_jll v1.11.3+1
[3a97d323] MPFR_jll v4.2.2+0
[14a3606d] MozillaCACerts_jll v2025.5.20
[4536629a] OpenBLAS_jll v0.3.29+0
[05823500] OpenLibm_jll v0.8.7+0
[458c3c95] OpenSSL_jll v3.5.1+0
[efcefdf7] PCRE2_jll v10.44.0+1
[bea87d4a] SuiteSparse_jll v7.8.3+2
[83775a58] Zlib_jll v1.3.1+2
[8e850b90] libblastrampoline_jll v5.15.0+0
[8e850ede] nghttp2_jll v1.64.0+1
[3f19e933] p7zip_jll v17.5.0+2
- Output of
versioninfo()
Julia Version 1.12.1
Commit ba1e628ee49 (2025-10-17 13:02 UTC)
Build Info:
Official https://julialang.org release
Platform Info:
OS: Linux (x86_64-linux-gnu)
CPU: 20 × 13th Gen Intel(R) Core(TM) i7-13800H
WORD_SIZE: 64
LLVM: libLLVM-18.1.7 (ORCJIT, alderlake)
GC: Built with stock GC
Threads: 1 default, 1 interactive, 1 GC (on 20 virtual cores)
Environment:
JULIA_EDITOR = code
JULIA_VSCODE_REPL = 1
Additional context
I am trying to use Catalyst with explicit naming of my variables and initial default values
It gets weirder :
mock5 = @reaction_network test5 begin #work
@parameters begin
doeswork = 25.0
b = 0
c = 0
end
doeswork, A --> B
b, B --> A
end
So the problem might come if there are both declarated parameters and deducted ones?
Thanks for the report.
I vaguely think I remember some similar issue from quite a while ago, but I have forgotten the details. I will have a look at it and figure out what is going on, but it do seem like an authetic error. No promises when we can have a fix out.
