Tom Harrop

@bgruening The current action works and the column names haven't been changed in this version. Or did you want me to try manually changing the names in the output and...

Thanks @edgardomortiz. Yes, I think it's probably better (in theory) to use dependencies from the package manager if they work, especially since the Captus docs recommend installing via conda. If...

 ---  --- @neoformit please LMK if you have any comments on the UX or anything else.

@neoformit that would be better, but the values of the seqtype variable are "p" and "n" so it makes the command section a bit nastier. See https://github.com/galaxyproject/tools-iuc/pull/5891/commits/7a2535904df9c001be95b776150b0829074e691d - worth it?

Thanks @bgruening . The lint failure is because of InterProScan's non-standard version numbering. > How is interproscan failing and how fast? We could also add a `stdio`, catch this error...

@bgruening yes please. @igormakunin is still seeing jobs where the input doesn't match the selected data type. It's not the ideal fix because the data still gets copied to the...

Yikes what happened here? Don't merge this, I must have rebased off the wrong branch.

Thanks @bgruening this should be OK now.

@mthang is this what you mean? https://github.com/galaxyproject/tools-iuc/pull/5700

Hi folks, I've put our dorado wrapper on the toolshed: https://toolshed.g2.bx.psu.edu/view/galaxy-australia/dorado/63d8ecfcfab1 We've tested in on Galaxy Australia running with Apptainer on GPU. Not sure about the license issues, but if...