Tim Robert-Fitzgerald
Tim Robert-Fitzgerald
@effigies It looks like I have some more work to fix the failings CI tests, but I'm wondering if this is something you'd accept into nipype in the first place?
@effigies I’d love some feedback before working on the tests as I’m not sure how stringent they should be. Right now the test runs whitestripe on a nifti downloaded from...
@effigies It seems one of the checks is failing because the auto test, `nipype/interfaces/tests/test_auto_WhiteStripe.py` doesn't exist. I tried running `make specs` but that didn't seem to generate the file? I...
@effigies looks like all the tests are passing now. On a somewhat unrelated note, I wanted to get your input / approval on another interface I wanted to add for...
@yarikoptic thanks for the response! I'm a bit confused though, are you saying the heudiconvXXX suffixes should only appear when the heuristic doesn't distinguish between two images _and_ doesn't include...
@yarikoptic I uploaded the full heuristic here: https://gist.github.com/Terf/89975b5aaaac65217c6204b886fae975 Thanks for taking a look! The two sequences do have the same protocol name, so I'm looking for a way to get...
@mgxd Out of curiosity, what do you mean exactly by "erroneous conversions"? What implications does ignoring study ID (as dcm2niix seems to do) have for analysis? This issue seems very...
I tried again with the `--minmeta` option (the help says that is the correct spelling), but got the same multi-stack files error. I will ask again but unfortunately I almost...
Is there any way I can convert my data so nibabel will read it and I can use heudiconv? Or is there a way to get heudiconv to skip over...
I will check in Monday to see what more about my data I'm allowed to share, but in short these particular DICOMs are from a Phillips scanner. However, my dataset...