MinorSeq

Minor Variant Calling and Phasing Tools

Availability

Latest version can be installed via bioconda package minorseq.

Please refer to our official pbbioconda page for information on Installation, Support, License, Copyright, and Disclaimer.

Quick Tools Overview

End-to-end workflow

Overview how to run your sample.

Minor variant caller

juliet identifies minor variants from aligned ccs reads.

Reduce alignment

fuse reduces an alignment into its closest representative sequence.

Swap BAM reference

cleric swaps the reference of an alignment by transitive alignment.

Minor variant pipeline

julietflow automatizes the minor variant pipeline.

Mix Data In-Silico

mixdata helps to mix clonal strains in-silico for benchmarking studies.

Disclaimer

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