Ouwen Huang

Cannot open files via host mounted Network File System volume.

1

I am trying to run this volume mounted docker container on top of a host which has an NFS. However, whenever I use the python `gdal.Open` command on a file...

fix: copy buffer to prevent oom in workers

3

Large uncompressed multiframe data will send the full arraybuffer in a typed view. For large uncompressed data such as tomo these will result in OOM issues. This fix pre-slices the...

Thought this might help people get started quickly.

Load from a file pointer instead of filepath string

1

I was wondering if there is an easy way for file pointers to be supported when loading `nii` files instead of string paths. This would allow loading from memory buffers...

Target Buffer Uint16 support?

1

I noticed that when loading the image we provide a target buffer of either Float32 or Uint8. In `cornerstonejs` I believe there was support for `Uint16` type. Larger medical image...

Added docker-compose example and reformatted documentation.

3

Hey Prashanth (@P7h), I enjoyed the simplicity of your repo greatly when trying to decide how to best run spark locally. I felt the repo could benefit from a docker-compose...

There is a bug in DCMTK if the tag is a list of numbers, only the zeroth element will be returned as a string. The numbers are not returned with...

Proposal for compositional layer support

2

Since cornerstonejs has layer API support (https://github.com/cornerstonejs/cornerstone/pull/68), the react-cornerstone-viewport could provide props support. This would allow for easy overlays of segmentation maps, heat maps, and other fusion based image information....

feat: added voiLUTFunction to MetadataProvider

6

Adds voiLUTFunction to the MetadataProvider VOI_LUT_MODULE

It seems that the initial div/window size downscales the rendered image but does not refresh on a window resize. This may be a cornerstonejs issue.