MetQy

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KEGG module completeness estimation is wrong

1

I have come across a problem in the way this package evaluates the completeness of KEGG pathway modules, given a number KOs, or something comparable. Specifically, this is referring to...

FWittmers

how to import the blastkoala results to MetQy

1

Hi, I have some bacteria genomes (Vibrio vulnificus strains), it was assembled using Spades, and then I use the generated contigs to generate a file.faa using prokka, an then I...

cabraham03

using query_missingGenes_from_module on multiple modules

3

Dear Andreas, I am trying to use your script query_missingGenes_from_module to spot missing genes from module but I need to do it recursively on multiple modules (a list provided) and...

arianccbasile

Information request regarding file upload

1

Dear Andreas, I am trying to use MetQy following the manual provided, but I am a little bit lost because I am not very good in using R. The software...

stefcamp

Preparation of input file.

6

Hello. I have metagenome fsatq files. How can I analyze files by converting them? thanks. Kohei

kohei-108